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GEO accession:
Sample GSM194387
Query DataSets for GSM194387
Status
Public on Mar 05, 2010
Title
lung_Dys
Sample type
SAGE
Anchor
NlaIII
Tag Count
155185
Tag Length
10
Source name
lung
Organism
Homo sapiens
Characteristics
Dysplastic bronchial epithelium
Extracted molecule
polyA RNA
Extraction protocol
MicroSAGE protocol: annealing to oligo (dT) magnetic beads
Description
Biopsy material
Submission date
May 24, 2007
Last update date
Mar 05, 2009
Contact name
Kim Marie Lonergan
E-mail(s)
klonergan@bccrc.ca
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (1)
GSE7898
Expression profiling of early-stage squamous cell non-small cell lung cancer.
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
139
895.71
AAAAAAAAAG
1
6.44
AAAAAAAAAT
2
12.89
AAAAAAAACA
1
6.44
AAAAAAAAGA
2
12.89
AAAAAAAAGG
2
12.89
AAAAAAAAGT
2
12.89
AAAAAAAATG
4
25.78
AAAAAAACAA
1
6.44
AAAAAAACAG
1
6.44
AAAAAAACTT
1
6.44
AAAAAAAGAA
1
6.44
AAAAAAAGCA
1
6.44
AAAAAAAGCT
1
6.44
AAAAAAAGGA
1
6.44
AAAAAAATAA
1
6.44
AAAAAAATAG
2
12.89
AAAAAAATCA
50
322.20
AAAAAAATGA
1
6.44
AAAAAAATGC
2
12.89
Total number of rows:
36390
Table truncated, full table size
656 Kbytes
.
Supplementary data files not provided
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