|
| Status |
Public on Dec 17, 2015 |
| Title |
Control2 |
| Sample type |
genomic |
| |
|
| Source name |
Control
|
| Organism |
Macaca mulatta |
| Characteristics |
agent: Untreated
infection: Untreated
tissue: Skeletal muscle (gastrocnemius)
|
| Growth protocol |
NA
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted from SKM (gastrocnemius) using standard methodologies from QIAGEN
|
| Label |
Cy3, Cy5
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
SAMPLE 2
non-treated control
|
| Data processing |
Data was analyzed on the GenomeStudio Software v2011.1
|
| |
|
| Submission date |
Dec 06, 2015 |
| Last update date |
Dec 17, 2015 |
| Contact name |
Jovanny Zabaleta |
| E-mail(s) |
jzabal@lsuhsc.edu
|
| Phone |
504-210 2979
|
| Organization name |
Louisiana State University Health Sciences Center
|
| Department |
Cancer Center/Interdiscipliary Oncology
|
| Lab |
LCRC 909
|
| Street address |
1700 Tulane Ave.
|
| City |
New Orleans |
| State/province |
LA |
| ZIP/Postal code |
70112 |
| Country |
USA |
| |
|
| Platform ID |
GPL8490 |
| Series (1) |
| GSE75729 |
Chronic binge alcohol administration dysregulates global regulatory gene networks associated with skeletal muscle wasting in simian immunodeficiency virus-infected macaques |
|
