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Sample GSM1972769 Query DataSets for GSM1972769
Status Public on Dec 04, 2021
Title Scripps registry VTE_16
Sample type genomic
 
Source name VTE
Organism Homo sapiens
Characteristics sample id: 1986
diagnosis: Venous thromboembolism (VTE)
Growth protocol EDTA Blood was collected and white blood cells were separated by centrifuge in the presence of Ficol
Extracted molecule genomic DNA
Extraction protocol DNA were extracted from white blood cells using commercial kit.
Label biotin
Label protocol not provided
 
Hybridization protocol Samples were hybridized with Axiom® Exome Genotyping Array (Affymetrix) and scanned at DNA Core Laboratory of the Scripps Research Institute.
Scan protocol Array scanning was performed according to the manufacturer's instruction (Affymetrix)
Data processing The genotype for each SNP for each subject was determined using the Affymetrix Genotyping Console (version 4.1.4)
 
Submission date Dec 15, 2015
Last update date Dec 04, 2021
Contact name Hiroshi Deguchi
E-mail(s) dhiroshi@scripps.edu
Organization name The Scripps Research Institute
Street address 10550 N Torrey pines Rd
City La Jolla
State/province Ca
ZIP/Postal code 92037
Country USA
 
Platform ID GPL21243
Series (1)
GSE76016 Exome Genotyping Study of Scripps Venous Thrombosis Registry using Axiom® Exome Genotyping Array

Supplementary file Size Download File type/resource
GSM1972769_C02_042913_HD_1986_V_AxiomExome319_C02.AxiomGT1.chp.gz 4.7 Mb (ftp)(http) CHP
GSM1972769_C02_042913_HD_1986_V_AxiomExome319_C02.AxiomGT1.chp.txt.gz 4.2 Mb (ftp)(http) TXT
Processed data provided as supplementary file
Processed data are available on Series record

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