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Sample GSM2043710 Query DataSets for GSM2043710
Status Public on May 09, 2016
Title whole blood-Outpatient-1 [9970511055_K]
Sample type RNA
 
Source name whole blood,Outpatient
Organism Homo sapiens
Characteristics Sex: Female
race: Black
age (mos): 19.4
disease: RSV
group: Outpatient
batch: 2015
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Whole blood samples (1-3ml) were collected in Tempus tubes (Applied Biosystems) and stored at -20°C
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description 9970511055_K
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Jan 21, 2016
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE77087 Nasopharyngeal microbiota, host transcriptome and disease severity in children with respiratory syncytial virus infection

Data table header descriptions
ID_REF
VALUE Average normalized.
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 -2.5505 0.7273
ILMN_1711886 115.4098 0
ILMN_1759828 8.2629 0.0299
ILMN_1674376 3.7926 0.1883
ILMN_1711888 4.2118 0.1623
ILMN_2111932 -2.0069 0.6883
ILMN_1686362 -0.5485 0.5325
ILMN_1723874 619.3448 0
ILMN_1662391 5.3239 0.1039
ILMN_1662390 -3.6049 0.8026
ILMN_1686361 5.3717 0.1039
ILMN_1686360 3.269 0.2078
ILMN_1723871 23.5961 0
ILMN_2086417 393.8963 0
ILMN_1686367 1355.2421 0
ILMN_1662397 -0.8732 0.5818
ILMN_1721218 0.4482 0.4312
ILMN_1711883 -2.2598 0.7052
ILMN_2351611 58.6647 0
ILMN_1674373 -9.1884 0.9935

Total number of rows: 47323

Table truncated, full table size 1219 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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