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Sample GSM2043715 Query DataSets for GSM2043715
Status Public on May 09, 2016
Title whole blood-Outpatient-6 [9972748019_K]
Sample type RNA
 
Source name whole blood,Outpatient
Organism Homo sapiens
Characteristics Sex: Male
race: Hispanic
age (mos): 2.7
disease: RSV
group: Outpatient
batch: 2015
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Whole blood samples (1-3ml) were collected in Tempus tubes (Applied Biosystems) and stored at -20°C
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description 9972748019_K
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Jan 21, 2016
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE77087 Nasopharyngeal microbiota, host transcriptome and disease severity in children with respiratory syncytial virus infection

Data table header descriptions
ID_REF
VALUE Average normalized.
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 -5.7448 0.9364
ILMN_1711886 79.5117 0
ILMN_1759828 0.6233 0.4
ILMN_1674376 -2.1927 0.7143
ILMN_1711888 2.2054 0.2481
ILMN_2111932 3.8678 0.1416
ILMN_1686362 2.7992 0.1935
ILMN_1723874 379.9749 0
ILMN_1662391 2.6103 0.2091
ILMN_1662390 2.1408 0.2532
ILMN_1686361 -0.2571 0.4922
ILMN_1686360 13.9664 0.0013
ILMN_1723871 21.7557 0
ILMN_2086417 243.7775 0
ILMN_1686367 1268.3899 0
ILMN_1662397 0.3717 0.4247
ILMN_1721218 -3.1393 0.8039
ILMN_1711883 0.8581 0.3766
ILMN_2351611 70.3792 0
ILMN_1674373 3.8916 0.1416

Total number of rows: 47323

Table truncated, full table size 1212 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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