NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2043720 Query DataSets for GSM2043720
Status Public on May 09, 2016
Title whole blood-Outpatient-11 [9972748016_A]
Sample type RNA
 
Source name whole blood,Outpatient
Organism Homo sapiens
Characteristics Sex: Female
race: White
age (mos): 7.7
disease: RSV
group: Outpatient
batch: 2015
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Whole blood samples (1-3ml) were collected in Tempus tubes (Applied Biosystems) and stored at -20°C
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description 9972748016_A
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Jan 21, 2016
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE77087 Nasopharyngeal microbiota, host transcriptome and disease severity in children with respiratory syncytial virus infection

Data table header descriptions
ID_REF
VALUE Average normalized.
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 2.7084 0.2195
ILMN_1711886 105.3824 0
ILMN_1759828 6.0964 0.039
ILMN_1674376 1.5245 0.3234
ILMN_1711888 7.655 0.0195
ILMN_2111932 -0.0133 0.4844
ILMN_1686362 -1.9242 0.7
ILMN_1723874 323.6583 0
ILMN_1662391 0.2184 0.461
ILMN_1662390 -4.732 0.9117
ILMN_1686361 -1.1171 0.6143
ILMN_1686360 3.5584 0.1597
ILMN_1723871 31.6457 0
ILMN_2086417 421.6354 0
ILMN_1686367 1416.3348 0
ILMN_1662397 2.4374 0.2455
ILMN_1721218 2.6929 0.2221
ILMN_1711883 -3.4298 0.8299
ILMN_2351611 59.8767 0
ILMN_1674373 -0.3038 0.5208

Total number of rows: 47323

Table truncated, full table size 1213 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap