NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2043721 Query DataSets for GSM2043721
Status Public on May 09, 2016
Title whole blood-Outpatient-12 [9970511055_A]
Sample type RNA
 
Source name whole blood,Outpatient
Organism Homo sapiens
Characteristics Sex: Female
race: White
age (mos): 1.6
disease: RSV
group: Outpatient
batch: 2015
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Whole blood samples (1-3ml) were collected in Tempus tubes (Applied Biosystems) and stored at -20°C
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description 9970511055_A
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Jan 21, 2016
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE77087 Nasopharyngeal microbiota, host transcriptome and disease severity in children with respiratory syncytial virus infection

Data table header descriptions
ID_REF
VALUE Average normalized.
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 -0.4234 0.5052
ILMN_1711886 84.6874 0
ILMN_1759828 2.3667 0.3013
ILMN_1674376 3.2381 0.2416
ILMN_1711888 -3.0719 0.7208
ILMN_2111932 0.2249 0.4468
ILMN_1686362 -7.648 0.9442
ILMN_1723874 310.4287 0
ILMN_1662391 -6.0432 0.8922
ILMN_1662390 -3.2044 0.7338
ILMN_1686361 -1.3125 0.574
ILMN_1686360 6.8061 0.0961
ILMN_1723871 22.0213 0.0039
ILMN_2086417 303.7813 0
ILMN_1686367 1402.7502 0
ILMN_1662397 -5.8017 0.8844
ILMN_1721218 -7.0728 0.926
ILMN_1711883 8.1055 0.0662
ILMN_2351611 73.1753 0
ILMN_1674373 0.3774 0.4364

Total number of rows: 47323

Table truncated, full table size 1231 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap