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Sample GSM2043726 Query DataSets for GSM2043726
Status Public on May 09, 2016
Title whole blood-Outpatient-17 [10010265080_I]
Sample type RNA
 
Source name whole blood,Outpatient
Organism Homo sapiens
Characteristics Sex: Male
race: Black
age (mos): 12.1
disease: RSV
group: Outpatient
batch: 2015
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Whole blood samples (1-3ml) were collected in Tempus tubes (Applied Biosystems) and stored at -20°C
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description 10010265080_I
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Jan 21, 2016
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE77087 Nasopharyngeal microbiota, host transcriptome and disease severity in children with respiratory syncytial virus infection

Data table header descriptions
ID_REF
VALUE Average normalized.
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 -7.4362 0.9714
ILMN_1711886 66.2716 0
ILMN_1759828 9.1549 0.0234
ILMN_1674376 1.8766 0.3195
ILMN_1711888 0.3862 0.4571
ILMN_2111932 2.8453 0.2377
ILMN_1686362 -4.5642 0.8675
ILMN_1723874 397.6832 0
ILMN_1662391 -2.8959 0.7532
ILMN_1662390 -5 0.8831
ILMN_1686361 7.16 0.0494
ILMN_1686360 2.7966 0.2403
ILMN_1723871 26.1993 0
ILMN_2086417 306.964 0
ILMN_1686367 1616.1359 0
ILMN_1662397 2.9971 0.2208
ILMN_1721218 2.1247 0.2922
ILMN_1711883 5.9219 0.0792
ILMN_2351611 65.2394 0
ILMN_1674373 -0.1072 0.5078

Total number of rows: 47323

Table truncated, full table size 1214 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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