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Sample GSM2043729 Query DataSets for GSM2043729
Status Public on May 09, 2016
Title whole blood-Outpatient-20 [9970511061_G]
Sample type RNA
 
Source name whole blood,Outpatient
Organism Homo sapiens
Characteristics Sex: Female
race: White
age (mos): 7.9
disease: RSV
group: Outpatient
batch: 2015
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Whole blood samples (1-3ml) were collected in Tempus tubes (Applied Biosystems) and stored at -20°C
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description 9970511061_G
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Jan 21, 2016
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE77087 Nasopharyngeal microbiota, host transcriptome and disease severity in children with respiratory syncytial virus infection

Data table header descriptions
ID_REF
VALUE Average normalized.
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 1.0402 0.3325
ILMN_1711886 120.9872 0
ILMN_1759828 8.3735 0.0052
ILMN_1674376 -2.6496 0.8169
ILMN_1711888 -2.4228 0.7935
ILMN_2111932 8.3641 0.0052
ILMN_1686362 4.1372 0.0922
ILMN_1723874 668.0399 0
ILMN_1662391 -3.0091 0.8558
ILMN_1662390 -3.5714 0.8922
ILMN_1686361 -3.5853 0.8922
ILMN_1686360 10.4844 0.0013
ILMN_1723871 21.8234 0
ILMN_2086417 506.9163 0
ILMN_1686367 1672.2482 0
ILMN_1662397 -1.2896 0.6714
ILMN_1721218 -0.7352 0.6039
ILMN_1711883 -0.1954 0.5078
ILMN_2351611 91.9579 0
ILMN_1674373 1.3279 0.2935

Total number of rows: 47323

Table truncated, full table size 1205 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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