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GEO accession:
Sample GSM21006
Query DataSets for GSM21006
Status
Public on May 02, 2004
Title
cDNA apetala2 set3
Sample type
RNA
Channel 1
Source name
wild-type inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Channel 2
Source name
apetala2 inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Comparison of gene expression profiles of wild-type and apetala2 inflorescences.
The data were preprocessed and normalized as described in Wellmer et al. (2004) Plant Cell 16(5).
Submission date
Apr 04, 2004
Last update date
May 27, 2005
Contact name
Frank Wellmer
E-mail(s)
wellmer@caltech.edu
Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1069
Series (2)
GSE1266
cDNA array expression profile apetala2
GSE1275
Gene expression profiling of Arabidopsis floral homeotic mutants
Data table header descriptions
ID_REF
WT_set3
Normalized signal intensity for the wild type sample
ap2_set3
Normalized signal intensity for the mutant sample
VALUE
log ratio (log2 of PRE_VALUE)
PRE_VALUE
Ratio: mutant/wild type
Data table
ID_REF
WT_set3
ap2_set3
VALUE
PRE_VALUE
GP010H5
0.030531388
0.030807411
0.0129843
1.009040622
GP033F8
0.048122762
0.053718383
0.1586963
1.11627807
GP035F12
0.017881297
0.034631209
0.9536213
1.936728094
GP005G8
0.016941314
0.022393154
0.4025123
1.321807344
GP034H5
0.04586743
0.036443214
-0.3318203
0.794533603
GP010E2
0.031054859
0.023447298
-0.4053973
0.755028335
GP034G11
0.062976099
0.05895387
-0.0952183
0.936130864
GP004G5
0.019025026
0.029334235
0.6246873
1.541876221
GP035E10
0.039439004
0.029100498
-0.4385793
0.737860866
GP033A9
0.057383412
0.039007552
-0.5568803
0.679770526
GP034G6
0.091996937
0.070792657
-0.3779863
0.769511024
GP033G4
0.033776162
0.035295493
0.0634793
1.044982355
GP032H12
0.058425666
0.052130765
-0.1644673
0.892257956
GP000B3
0.018573861
0.019158669
0.0447243
1.031485504
GP010H6
0.024922108
0.02219252
-0.1673533
0.890475223
GP010B8
0.026890022
0.030592512
0.1861083
1.137690124
GP010F1
0.04104854
0.03575733
-0.1990923
0.871098692
GP000E1
0.040235725
0.042638401
0.0836763
1.059714996
GP010C4
0.031682209
0.025913272
-0.2899823
0.817912432
GP033D6
0.129250874
0.090990516
-0.5063863
0.703983754
Total number of rows:
9313
Table truncated, full table size
494 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM21006.GPR.gz
825.5 Kb
(ftp)
(http)
GPR
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