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Sample GSM216562 Query DataSets for GSM216562
Status Public on Aug 10, 2007
Title P3_AS_HeLa_sRW_C03_T1
Sample type RNA
 
Source name Whole cell RNA from HeLa cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule total RNA
Extraction protocol Whole-cell short RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date Aug 09, 2007
Last update date Aug 14, 2011
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5236
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x1946_y149_chr10_2701087 4 A
x706_y2535_chr10_5336422 2 A
x2044_y1919_chr10_5336699 -3.5 A
x1023_y579_chr10_6861023 19.75 A
x1478_y2479_chr10_6861290 0.5 A
x2493_y633_chr10_7236254 -0.5 A
x47_y830_chr10_8595472 0.5 A
x853_y821_chr10_8595608 -3.25 A
x43_y446_chr10_8595653 -13.75 A
x1410_y1007_chr10_8595658 3.5 A
x2254_y861_chr10_8595663 -2 A
x774_y583_chr10_8595668 0 A
x2106_y859_chr10_8595673 -15.25 A
x1776_y997_chr10_8595678 15.75 A
x1631_y1769_chr10_10813930 -2.25 A
x769_y13_chr10_15171124 -0.75 A
x1623_y933_chr10_15175262 -4.5 A
x1968_y411_chr10_15175594 -1.5 A
x1024_y613_chr10_15236622 4.5 A
x1611_y64_chr10_15236693 -1.5 A

Total number of rows: 2983761

Table truncated, full table size 92469 Kbytes.




Supplementary file Size Download File type/resource
GSM216562_1.cel.bz2 22.6 Mb (ftp)(http) CEL
GSM216562_2.cel.bz2 20.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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