|
| Status |
Public on Oct 04, 2017 |
| Title |
short_survival stage I-IIA [7018852019_F] |
| Sample type |
RNA |
| |
|
| Source name |
ductal adenocarcinoma, stage IB, short survival
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: pancreatic ductal adenocarcinoma
tumor_stage: IB
months_survival: 21.47
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted with High Pure FFPE RNA Micro kit (Roche) following instructions given by the manufacturer. RNA from each sample was proportionally amplified with a Sensation TM RNA Amplification kit (Genisphere).
|
| Label |
biotin
|
| Label protocol |
TotalPrep™-96 RNA Amplification Kit (Ambion™) was used to prepare samples.
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol.
|
| Scan protocol |
The Illumina HiScan was used to scan the arrays.
|
| Description |
7018852019_F
survival < 24 months
|
| Data processing |
The data were normalised using quantile normalisation with BeadArray in R.
|
| |
|
| Submission date |
Jul 10, 2016 |
| Last update date |
May 08, 2018 |
| Contact name |
Ana Barbara Garcia |
| E-mail(s) |
a.barbara.garcia@uv.es
|
| Organization name |
CIBERDEM-INCLIVA
|
| Street address |
menendez pelayo 4acc
|
| City |
valencia |
| State/province |
valencia |
| ZIP/Postal code |
46010 |
| Country |
Spain |
| |
|
| Platform ID |
GPL14951 |
| Series (1) |
| GSE84219 |
Expression analysis in ductal adenocarcinoma in patients with low and high survival after tumor resection |
|
