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Sample GSM224 Query DataSets for GSM224
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-10, tumor 2 (part 2 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=NA
died=NA
tumorsize.cm=8
comment=The two-hybround repetition does not conform to the usual protocol
sex=m
age=57
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_jul99 filter=p1 reuse=2 date=16-Jul-1999
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 196894 12100 184794
2 97751 12100 85651
3 17839 12100 5739
4 8730 12100 -3370
5 18880 12100 6780
6 352194 12100 340094
7 1396 12100 -10704
8 143831 12100 131731
9 90730 12100 78630
10 28405 12100 16305
11 39816 12100 27716
12 218006 12100 205906
13 9243 12100 -2857
14 128495 12100 116395
15 6738 12100 -5362
16 3345 12100 -8755
17 682013 14884 667129
18 34703 14884 19819
19 6464 14884 -8420
20 46667 14884 31783

Total number of rows: 36864

Table truncated, full table size 830 Kbytes.




Supplementary data files not provided

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