|
Status |
Public on Jul 19, 2016 |
Title |
MS Patient_CODE17 - T1 |
Sample type |
RNA |
|
|
Source name |
PBMCs
|
Organism |
Homo sapiens |
Characteristics |
time point: T1 age: 32 tissue: PBMCs
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was extracted using the QIAzol® Lysis Reagent, according to the manufacturer’s instructions. Quality control was performed with Biorad Experion.
|
Label |
biotin
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
replicate 1
|
Data processing |
The data were normalised using quantile normalization (background was not subtracted) with Illumina Genome Studio Software; items with detection p values >0.001 or AVG Signal <120 in more than 1 group were excluded. Data were analyzed with non parametric analysis plus False Discovery Rate, FDR.
|
|
|
Submission date |
Jul 19, 2016 |
Last update date |
Jul 19, 2016 |
Contact name |
Antonio Moschetta |
Organization name |
IRCCS Ospedale Oncologico di Bari
|
Street address |
Via Orazio Flacco, 65
|
City |
Bari |
ZIP/Postal code |
70124 |
Country |
Italy |
|
|
Platform ID |
GPL10558 |
Series (2) |
GSE75027 |
GE/miRNA expression profile of PBMCs in healthy subjects and MS patients after extra virgin olive oil (EVOO) intake |
GSE84591 |
GE expression profile of PBMCs in healthy subjects and MS patients after extra virgin olive oil (EVOO) intake - PART 3 - MS Patients |
|