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Sample GSM2247818 Query DataSets for GSM2247818
Status Public on Jul 22, 2016
Title Gene profile of MR Male
Sample type RNA
 
Source name MR Male
Organism Homo sapiens
Characteristics diagnosis: mentally retarded
age: 18 years
tissue: Peripheral blood
Sex: male
Extracted molecule polyA RNA
Extraction protocol Total RNA was extracted using NucleoSpin® RNA Blood Midi kit
Label biotin
Label protocol Biotinylated cRNA were prepared from 0.55 ug total RNA using the Illumina TotalPrep RNA Amplification Kit (Ambion, Austin,TX)
 
Hybridization protocol Following fragmentation, 0.75 ug of cRNA were hybridized to the Illumina Expression Beadchip according to the protocols provided by the manufacturer
Scan protocol Arrays were scanned using the Illumina Bead Array Reader Confocal Scanner
Description N_M
140507AE-01
up and down regulated genes
Data processing Array data export processing and analysis was performed using Illumina GenomeStudio v2011.1 (Gene Expression Module v1.9.0)
 
Submission date Jul 21, 2016
Last update date Jul 22, 2016
Contact name Thulasi bai K
E-mail(s) malaithulasi@gmail.com
Phone 09884003734
Organization name Loyola College
Department Bioinformatics
Lab Acme progen Lab
Street address 39 Vellalar Street,
City Chennai
State/province Tamilnadu
ZIP/Postal code 600095
Country India
 
Platform ID GPL10558
Series (1)
GSE84701 Extraneous Genes of Mentally Retarded Subject in Terms of Microarray a gene expression profiling technology

Data table header descriptions
ID_REF
VALUE probes signal value was transformed by logarithm and normalized by quantile method

Data table
ID_REF VALUE
ILMN_1343291 15.906179
ILMN_1343295 12.485495
ILMN_1651199 6.645399
ILMN_1651209 7.111747
ILMN_1651210 6.76034
ILMN_1651221 7.130453
ILMN_1651228 13.60339
ILMN_1651229 8.39875
ILMN_1651230 6.524955
ILMN_1651232 6.933932
ILMN_1651235 6.570366
ILMN_1651236 6.614063
ILMN_1651237 6.669885
ILMN_1651238 6.404071
ILMN_1651249 6.812295
ILMN_1651253 6.589028
ILMN_1651254 11.925331
ILMN_1651259 7.857397
ILMN_1651260 6.255744
ILMN_1651262 11.43083

Total number of rows: 47322

Table truncated, full table size 1016 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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