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Sample GSM225348 Query DataSets for GSM225348
Status Public on Sep 01, 2007
Title D08 12h TLR2/1L
Sample type RNA
 
Source name D08 0h Media
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1924.83 P 0.000972149
AFFX-BioB-M_at 4127.74 P 7.00668e-05
AFFX-BioB-3_at 1527.11 P 0.000662269
AFFX-BioC-5_at 5132.92 P 0.000195116
AFFX-BioC-3_at 4274.43 P 7.00668e-05
AFFX-BioDn-5_at 4502.59 P 7.00668e-05
AFFX-BioDn-3_at 30589.3 P 0.00010954
AFFX-CreX-5_at 40934.4 P 4.42873e-05
AFFX-CreX-3_at 59341.8 P 4.42873e-05
AFFX-DapX-5_at 22.8022 A 0.5
AFFX-DapX-M_at 96.2238 A 0.41138
AFFX-DapX-3_at 39.0221 A 0.852061
AFFX-LysX-5_at 18.5411 A 0.804734
AFFX-LysX-M_at 194.002 A 0.5
AFFX-LysX-3_at 87.0948 A 0.5
AFFX-PheX-5_at 17.2246 A 0.921998
AFFX-PheX-M_at 15.1533 A 0.916408
AFFX-PheX-3_at 227.597 A 0.631562
AFFX-ThrX-5_at 28.7488 A 0.659339
AFFX-ThrX-M_at 21.9688 A 0.737173

Total number of rows: 22283

Table truncated, full table size 670 Kbytes.




Supplementary file Size Download File type/resource
GSM225348.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225348.EXP.gz 476 b (ftp)(http) EXP
Processed data included within Sample table

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