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Sample GSM225354 Query DataSets for GSM225354
Status Public on Sep 01, 2007
Title D05 6h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1965.65 P 0.00618711
AFFX-BioB-M_at 4483.24 P 0.000296708
AFFX-BioB-3_at 1499.6 P 0.00762003
AFFX-BioC-5_at 5548.45 P 0.000224668
AFFX-BioC-3_at 4064.89 P 7.00668e-05
AFFX-BioDn-5_at 4190.06 P 7.00668e-05
AFFX-BioDn-3_at 33771.1 P 0.000195116
AFFX-CreX-5_at 34380.7 P 4.42873e-05
AFFX-CreX-3_at 54605.3 P 4.42873e-05
AFFX-DapX-5_at 219.919 A 0.340661
AFFX-DapX-M_at 224.717 A 0.139482
AFFX-DapX-3_at 20.094 A 0.984817
AFFX-LysX-5_at 100.892 A 0.165861
AFFX-LysX-M_at 38.2309 A 0.783476
AFFX-LysX-3_at 167.732 A 0.287743
AFFX-PheX-5_at 21.868 A 0.814869
AFFX-PheX-M_at 45.0196 A 0.897835
AFFX-PheX-3_at 128.158 A 0.645547
AFFX-ThrX-5_at 65.0799 A 0.659339
AFFX-ThrX-M_at 161.108 A 0.41138

Total number of rows: 22283

Table truncated, full table size 667 Kbytes.




Supplementary file Size Download File type/resource
GSM225354.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225354.EXP.gz 475 b (ftp)(http) EXP
Processed data included within Sample table

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