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Sample GSM225357 Query DataSets for GSM225357
Status Public on Sep 01, 2007
Title D04 3h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1032.7 P 0.0113844
AFFX-BioB-M_at 2120.96 P 0.000581214
AFFX-BioB-3_at 1174.39 P 0.002867
AFFX-BioC-5_at 3296.14 P 0.000224668
AFFX-BioC-3_at 2797.58 P 0.000224668
AFFX-BioDn-5_at 2769.85 P 0.00010954
AFFX-BioDn-3_at 18416.5 P 0.000258358
AFFX-CreX-5_at 23811 P 4.42873e-05
AFFX-CreX-3_at 38508.5 P 4.42873e-05
AFFX-DapX-5_at 115.365 A 0.354453
AFFX-DapX-M_at 101.342 A 0.58862
AFFX-DapX-3_at 39.4016 A 0.9273
AFFX-LysX-5_at 16.834 A 0.953518
AFFX-LysX-M_at 57.8032 A 0.617401
AFFX-LysX-3_at 20.3109 A 0.749204
AFFX-PheX-5_at 20.8626 A 0.957038
AFFX-PheX-M_at 22.5253 A 0.904333
AFFX-PheX-3_at 106.695 A 0.712257
AFFX-ThrX-5_at 32.271 A 0.883887
AFFX-ThrX-M_at 146.331 A 0.60308

Total number of rows: 22283

Table truncated, full table size 669 Kbytes.




Supplementary file Size Download File type/resource
GSM225357.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225357.EXP.gz 474 b (ftp)(http) EXP
Processed data included within Sample table

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