NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM225361 Query DataSets for GSM225361
Status Public on Sep 01, 2007
Title D06 6h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2324.65 P 0.000972149
AFFX-BioB-M_at 6583.3 P 7.00668e-05
AFFX-BioB-3_at 3935.79 P 0.000126798
AFFX-BioC-5_at 9192.63 P 8.14279e-05
AFFX-BioC-3_at 7003.24 P 5.16732e-05
AFFX-BioDn-5_at 8951.48 P 4.42873e-05
AFFX-BioDn-3_at 51990.7 P 9.4506e-05
AFFX-CreX-5_at 73792.1 P 4.42873e-05
AFFX-CreX-3_at 113610 P 4.42873e-05
AFFX-DapX-5_at 205.873 A 0.195266
AFFX-DapX-M_at 101.036 A 0.544587
AFFX-DapX-3_at 61.6723 A 0.860518
AFFX-LysX-5_at 28.5365 A 0.868639
AFFX-LysX-M_at 150.287 A 0.52976
AFFX-LysX-3_at 67.516 A 0.631562
AFFX-PheX-5_at 59.0314 A 0.897835
AFFX-PheX-M_at 74.7701 A 0.814869
AFFX-PheX-3_at 105.932 A 0.699394
AFFX-ThrX-5_at 57.6636 A 0.834139
AFFX-ThrX-M_at 61.2973 A 0.772364

Total number of rows: 22283

Table truncated, full table size 664 Kbytes.




Supplementary file Size Download File type/resource
GSM225361.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM225361.EXP.gz 475 b (ftp)(http) EXP
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap