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Sample GSM225368 Query DataSets for GSM225368
Status Public on Sep 01, 2007
Title D03 3h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1357.55 P 0.00359458
AFFX-BioB-M_at 3566.11 P 6.02111e-05
AFFX-BioB-3_at 2058.65 P 0.000662269
AFFX-BioC-5_at 6608.49 P 0.000146581
AFFX-BioC-3_at 5149.12 P 6.02111e-05
AFFX-BioDn-5_at 4321.57 P 0.000146581
AFFX-BioDn-3_at 33392.2 P 0.000126798
AFFX-CreX-5_at 40902.1 P 4.42873e-05
AFFX-CreX-3_at 64181 P 4.42873e-05
AFFX-DapX-5_at 82.058 A 0.5
AFFX-DapX-M_at 124.294 A 0.58862
AFFX-DapX-3_at 102.77 A 0.631562
AFFX-LysX-5_at 6.7097 A 0.949771
AFFX-LysX-M_at 252.215 A 0.48511
AFFX-LysX-3_at 58.5319 A 0.48511
AFFX-PheX-5_at 17.6674 A 0.981719
AFFX-PheX-M_at 17.2363 A 0.957038
AFFX-PheX-3_at 332.286 A 0.382599
AFFX-ThrX-5_at 43.4959 A 0.814869
AFFX-ThrX-M_at 32.4643 A 0.814869

Total number of rows: 22283

Table truncated, full table size 666 Kbytes.




Supplementary file Size Download File type/resource
GSM225368.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225368.EXP.gz 475 b (ftp)(http) EXP
Processed data included within Sample table

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