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Sample GSM225372 Query DataSets for GSM225372
Status Public on Sep 01, 2007
Title D10 24h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2226.06 P 0.0125468
AFFX-BioB-M_at 3183.71 P 0.000195116
AFFX-BioB-3_at 1680.3 P 0.00227496
AFFX-BioC-5_at 5438.52 P 0.000195116
AFFX-BioC-3_at 3691.14 P 0.000169227
AFFX-BioDn-5_at 3406.64 P 4.42873e-05
AFFX-BioDn-3_at 25100.5 P 0.000146581
AFFX-CreX-5_at 34328.1 P 4.42873e-05
AFFX-CreX-3_at 58246.7 P 4.42873e-05
AFFX-DapX-5_at 112.798 A 0.41138
AFFX-DapX-M_at 262.082 A 0.287743
AFFX-DapX-3_at 47.9404 A 0.852061
AFFX-LysX-5_at 23.3525 A 0.737173
AFFX-LysX-M_at 430.599 A 0.368438
AFFX-LysX-3_at 268.473 A 0.165861
AFFX-PheX-5_at 22.0098 A 0.963431
AFFX-PheX-M_at 51.7268 A 0.868639
AFFX-PheX-3_at 380.194 A 0.58862
AFFX-ThrX-5_at 57.8726 A 0.631562
AFFX-ThrX-M_at 40.113 A 0.631562

Total number of rows: 22283

Table truncated, full table size 667 Kbytes.




Supplementary file Size Download File type/resource
GSM225372.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM225372.EXP.gz 472 b (ftp)(http) EXP
Processed data included within Sample table

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