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Sample GSM225377 Query DataSets for GSM225377
Status Public on Sep 01, 2007
Title D01 12h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1762.97 P 0.0020226
AFFX-BioB-M_at 3013.04 P 0.000296708
AFFX-BioB-3_at 1638.42 P 0.000581214
AFFX-BioC-5_at 4716.2 P 9.4506e-05
AFFX-BioC-3_at 3486.57 P 7.00668e-05
AFFX-BioDn-5_at 4265.08 P 5.16732e-05
AFFX-BioDn-3_at 24728.9 P 8.14279e-05
AFFX-CreX-5_at 37607.4 P 4.42873e-05
AFFX-CreX-3_at 54308.9 P 4.42873e-05
AFFX-DapX-5_at 34.6594 A 0.39692
AFFX-DapX-M_at 107.093 A 0.48511
AFFX-DapX-3_at 54.4833 A 0.897835
AFFX-LysX-5_at 26.6542 A 0.824672
AFFX-LysX-M_at 37.09 A 0.712257
AFFX-LysX-3_at 56.906 A 0.631562
AFFX-PheX-5_at 14.8665 A 0.971543
AFFX-PheX-M_at 27.7569 A 0.937071
AFFX-PheX-3_at 85.7189 A 0.5
AFFX-ThrX-5_at 29.0141 A 0.737173
AFFX-ThrX-M_at 24.0155 A 0.814869

Total number of rows: 22283

Table truncated, full table size 672 Kbytes.




Supplementary file Size Download File type/resource
GSM225377.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225377.EXP.gz 470 b (ftp)(http) EXP
Processed data included within Sample table

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