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Sample GSM225655 Query DataSets for GSM225655
Status Public on Sep 01, 2007
Title D07 6h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 867.192 P 0.00762003
AFFX-BioB-M_at 1945.38 P 0.000296708
AFFX-BioB-3_at 1078.95 P 0.00179591
AFFX-BioC-5_at 4431.48 P 0.00010954
AFFX-BioC-3_at 3184.12 P 7.00668e-05
AFFX-BioDn-5_at 5017.07 P 5.16732e-05
AFFX-BioDn-3_at 27068 P 9.4506e-05
AFFX-CreX-5_at 39928.5 P 4.42873e-05
AFFX-CreX-3_at 60428 P 4.42873e-05
AFFX-DapX-5_at 174.151 A 0.139482
AFFX-DapX-M_at 27.4447 A 0.783476
AFFX-DapX-3_at 51.3114 A 0.686277
AFFX-LysX-5_at 141.13 A 0.440646
AFFX-LysX-M_at 164.72 A 0.368438
AFFX-LysX-3_at 166.287 A 0.300606
AFFX-PheX-5_at 20.3046 A 0.916408
AFFX-PheX-M_at 165.898 A 0.574038
AFFX-PheX-3_at 217.256 A 0.262827
AFFX-ThrX-5_at 25.2192 A 0.876428
AFFX-ThrX-M_at 102.125 A 0.5

Total number of rows: 22283

Table truncated, full table size 670 Kbytes.




Supplementary file Size Download File type/resource
GSM225655.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225655.EXP.gz 462 b (ftp)(http) EXP
Processed data included within Sample table

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