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Sample GSM225661 Query DataSets for GSM225661
Status Public on Sep 01, 2007
Title D09 24h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1116.65 P 0.0166701
AFFX-BioB-M_at 2503.74 P 0.000146581
AFFX-BioB-3_at 932.652 P 0.0166701
AFFX-BioC-5_at 4561.26 P 0.000126798
AFFX-BioC-3_at 3003.21 P 4.42873e-05
AFFX-BioDn-5_at 3166.96 P 6.02111e-05
AFFX-BioDn-3_at 22801.8 P 0.00010954
AFFX-CreX-5_at 34852.8 P 4.42873e-05
AFFX-CreX-3_at 52286 P 4.42873e-05
AFFX-DapX-5_at 209.64 A 0.470241
AFFX-DapX-M_at 127.784 A 0.340661
AFFX-DapX-3_at 21.681 A 0.932322
AFFX-LysX-5_at 80.0404 A 0.574038
AFFX-LysX-M_at 141.605 A 0.5
AFFX-LysX-3_at 171.931 A 0.382599
AFFX-PheX-5_at 22.6939 A 0.957038
AFFX-PheX-M_at 19.82 A 0.945787
AFFX-PheX-3_at 159.477 A 0.645547
AFFX-ThrX-5_at 48.8924 A 0.712257
AFFX-ThrX-M_at 94.7595 A 0.60308

Total number of rows: 22283

Table truncated, full table size 669 Kbytes.




Supplementary file Size Download File type/resource
GSM225661.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM225661.EXP.gz 474 b (ftp)(http) EXP
Processed data included within Sample table

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