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Sample GSM225881 Query DataSets for GSM225881
Status Public on Sep 01, 2007
Title D14 12h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Human dendritic cells derived with GM-CSF and IL-4
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human dendritic cells with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 30, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2786.45 P 0.000753643
AFFX-BioB-M_at 5108.82 P 4.42873e-05
AFFX-BioB-3_at 2060.64 P 0.000296708
AFFX-BioC-5_at 8399.19 P 7.00668e-05
AFFX-BioC-3_at 5159.83 P 5.16732e-05
AFFX-BioDn-5_at 8631.44 P 5.16732e-05
AFFX-BioDn-3_at 39930.6 P 5.16732e-05
AFFX-CreX-5_at 72682.6 P 4.42873e-05
AFFX-CreX-3_at 99934.7 P 4.42873e-05
AFFX-DapX-5_at 57.906 A 0.470241
AFFX-DapX-M_at 56.9645 A 0.51489
AFFX-DapX-3_at 30.3427 A 0.937071
AFFX-LysX-5_at 42.2619 A 0.672921
AFFX-LysX-M_at 51.3089 A 0.724854
AFFX-LysX-3_at 72.8773 A 0.52976
AFFX-PheX-5_at 14.5393 A 0.910522
AFFX-PheX-M_at 11.8761 A 0.883887
AFFX-PheX-3_at 332.2 A 0.368438
AFFX-ThrX-5_at 145.812 A 0.368438
AFFX-ThrX-M_at 87.3701 A 0.686277

Total number of rows: 22283

Table truncated, full table size 671 Kbytes.




Supplementary file Size Download File type/resource
GSM225881.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM225881.EXP.gz 473 b (ftp)(http) EXP
Processed data included within Sample table

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