NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM225885 Query DataSets for GSM225885
Status Public on Sep 01, 2007
Title D15 12h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Human dendritic cells derived with GM-CSF and IL-4
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human dendritic cells with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 30, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 939.436 P 0.00499819
AFFX-BioB-M_at 2598.08 P 0.000126798
AFFX-BioB-3_at 1161.33 P 0.000340305
AFFX-BioC-5_at 3155.44 P 0.000169227
AFFX-BioC-3_at 2495.98 P 5.16732e-05
AFFX-BioDn-5_at 3682.42 P 5.16732e-05
AFFX-BioDn-3_at 21868.6 P 0.000126798
AFFX-CreX-5_at 27524.8 P 4.42873e-05
AFFX-CreX-3_at 46073.5 P 4.42873e-05
AFFX-DapX-5_at 78.9213 A 0.227636
AFFX-DapX-M_at 47.2865 A 0.313723
AFFX-DapX-3_at 75.4574 A 0.712257
AFFX-LysX-5_at 8.45645 A 0.897835
AFFX-LysX-M_at 84.1952 A 0.724854
AFFX-LysX-3_at 6.69497 A 0.868639
AFFX-PheX-5_at 7.1446 A 0.949771
AFFX-PheX-M_at 15.3491 A 0.883887
AFFX-PheX-3_at 161.262 A 0.51489
AFFX-ThrX-5_at 26.5869 A 0.814869
AFFX-ThrX-M_at 32.3018 A 0.645547

Total number of rows: 22283

Table truncated, full table size 673 Kbytes.




Supplementary file Size Download File type/resource
GSM225885.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM225885.EXP.gz 473 b (ftp)(http) EXP
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap