|
| Status |
Public on Sep 30, 2016 |
| Title |
M1 iPS cells |
| Sample type |
RNA |
| |
|
| Source name |
induced pluripotent stem cells
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: induced pluripotent stem cells
|
| Treatment protocol |
none
|
| Growth protocol |
human pluripotent stem cell medium
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen DNA extraction kit
|
| Label |
Biotin (C, G), Dinitrophenyl (A, T)
|
| Label protocol |
Biotin (C, G), Dinitrophenyl (A, T), Standard Illumina labelling protocol
|
| |
|
| Hybridization protocol |
Standard Illumina hybridisation protocol
|
| Scan protocol |
Standard Illumina scanning protocol for BeadChip Arrays
|
| Data processing |
The scanned data files were processed by GenomeStudio Genotyping module v1.9, using the cluster file HumanCytoSNP-12v2-1_H.egt provided by Illumina. Raw data was also uploaded to KaryoStudio (Illumina) for generation of karyotype reports (see publication).
|
| |
|
| Submission date |
Sep 29, 2016 |
| Last update date |
Sep 30, 2016 |
| Contact name |
Sven Poths |
| E-mail(s) |
sven.poths@med.uni-tuebingen.de
|
| Phone |
+4970712972298
|
| Organization name |
University hospital Tuebingen
|
| Department |
Medical Genetics
|
| Street address |
Calwerstr. 7
|
| City |
Tuebingen |
| ZIP/Postal code |
72076 |
| Country |
Germany |
| |
|
| Platform ID |
GPL8855 |
| Series (1) |
| GSE87462 |
Genetic correction of a LRRK2 mutation in human iPSCs links parkinsonian neurodegeneration to ERK-dependent changes in gene expression. |
|
