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Sample GSM241152 Query DataSets for GSM241152
Status Public on Nov 06, 2007
Title WT strain grown in YPD under Normoxia (08-15-06_Philpott_YG_S98_8)
Sample type RNA
 
Source name 8-WT strain grown in YPD under Normoxia
Organism Saccharomyces cerevisiae
Characteristics BY4742 strain
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol standard Affymetrix procedure
Scan protocol standard Affymetrix procedure
Description Gene expression data from wild type strain under normoxic conditions
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Nov 02, 2007
Last update date Aug 14, 2011
Contact name Olga Protchenko
E-mail(s) olgap@intra.niddk.nih.gov
Organization name National Institutes of health
Department NIDDK
Street address 10 Center Dr, Bldg.10-Rm.9B-05
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL90
Series (1)
GSE9514 Changes in gene expression in response to heme deficiency and hypoxia

Data table header descriptions
ID_REF Probe_set Id
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
10484_at 7.1614113 A 0.2674626
10485_at 15.357408 P 0.011447392
10486_s_at 4.6120906 A 0.5819307
10442_s_at 7.3020353 A 0.33955786
10443_at 11.3586645 A 0.15052709
10444_at 140.87999 P 0.004862762
10445_s_at 72.24511 P 2.66E-04
10446_s_at 67.34496 P 8.05E-04
10447_s_at 160.58759 P 6.73E-04
10448_s_at 456.78363 P 2.19E-04
10449_at 4.0876923 A 0.8103127
10450_at 12.280314 P 0.017000513
10451_at 1.2215637 A 0.8494729
10452_at 121.61251 P 2.19E-04
10453_at 10.204128 P 0.014936572
10454_at 16.82215 A 0.107300945
10455_at 13.58037 P 0.031335693
10456_at 858.84924 P 2.66E-04
10457_at 8.491051 P 0.017000513
10458_at 37.59253 P 0.001141097

Total number of rows: 9335

Table truncated, full table size 274 Kbytes.




Supplementary file Size Download File type/resource
GSM241152.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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