GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM241550
Query DataSets for GSM241550
Status
Public on Mar 28, 2008
Title
RatFemur_ReserveZone_46d
Sample type
RNA
Source name
46 day old rat femur
Organism
Rattus norvegicus
Characteristics
Age 46d
Male
Normal reserve zone laser-dissected from femur
Biomaterial provider
Damron
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy
Label
biotin
Label protocol
Nugen Ovation
Hybridization protocol
Affymetrix FS450_0004
Scan protocol
Affymetrix GeneChip 7G
Description
None
Data processing
Initial analysis - MAS5/GCOS
Final analysis - RMA
Submission date
Nov 06, 2007
Last update date
Aug 14, 2011
Contact name
Frank A Middleton
E-mail(s)
middletf@upstate.edu
Phone
315-464-7721
Organization name
SUNY Upstate Medical Univ
Department
Neuroscience and Physiology
Street address
505 Irving Avenue
City
Syracuse
State/province
NY
ZIP/Postal code
13210
Country
USA
Platform ID
GPL1355
Series (1)
GSE9537
Microarray analysis of perichondral and reserve growth plate zones
Data table header descriptions
ID_REF
VALUE
GCOS Expression value
ABS_CALL
GCOS Present/Absent Call
DETECTION P-VALUE
GCOS Detection P value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
23831.6
P
4.42873e-05
AFFX-BioB-M_at
44651.9
P
4.42873e-05
AFFX-BioB-3_at
35361.1
P
4.42873e-05
AFFX-BioC-5_at
64561.5
P
4.42873e-05
AFFX-BioC-3_at
41742.7
P
4.42873e-05
AFFX-BioDn-5_at
138824
P
4.42873e-05
AFFX-BioDn-3_at
185535
P
4.42873e-05
AFFX-CreX-5_at
364145
P
5.16732e-05
AFFX-CreX-3_at
373060
P
4.42873e-05
AFFX-DapX-5_at
80.9645
A
0.41138
AFFX-DapX-M_at
153.217
A
0.514891
AFFX-DapX-3_at
36.2551
A
0.631562
AFFX-LysX-5_at
46.8782
A
0.659339
AFFX-LysX-M_at
42.1327
A
0.514891
AFFX-LysX-3_at
113.856
A
0.425962
AFFX-PheX-5_at
18.8189
A
0.749223
AFFX-PheX-M_at
24.0484
A
0.749242
AFFX-PheX-3_at
110.141
A
0.382599
AFFX-ThrX-5_at
24.9732
A
0.9273
AFFX-ThrX-M_at
59.9783
A
0.804734
Total number of rows:
31099
Table truncated, full table size
932 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM241550.CEL.gz
2.0 Mb
(ftp)
(http)
CEL
GSM241550.CHP.gz
170.1 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
