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GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jun 04, 2008 |
| Title |
Cervical cancer_88-04T |
| Sample type |
RNA |
| |
|
| Source name |
Cervical cancer_88-04T
|
| Organism |
Homo sapiens |
| Characteristics |
Cervical cancer, squamous cell carcinoma, microdissected, stage IIB1, HPV 18, HPV 45
|
| Biomaterial provider |
Columbia University Medical Center
|
| Treatment protocol |
None
|
| Growth protocol |
None
|
| Extracted molecule |
total RNA |
| Extraction protocol |
TRIzol
|
| Label |
biotin
|
| Label protocol |
Affymetrix
|
| |
|
| Hybridization protocol |
Affymetrix
|
| Scan protocol |
Affymetrix
|
| Description |
Cervical cancer, microdissected squamous cell carcinoma
|
| Data processing |
GCOS
|
| |
|
| Submission date |
Dec 07, 2007 |
| Last update date |
Feb 26, 2020 |
| Contact name |
Murty Vundavalli |
| E-mail(s) |
vvm2@columbia.edu
|
| Phone |
(212) 851-4621
|
| Fax |
(212) 305-5498
|
| Organization name |
Columbia University Medical Center
|
| Department |
Pathology
|
| Lab |
Cancer Cytogenetics
|
| Street address |
1130 St Nicholas Ave
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10032 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE9750 |
Identification of gene expression profiles in cervical cancer |
|
| Relations |
| Reanalyzed by |
GSE145976 |
| Data table header descriptions |
| ID_REF |
|
| VALUE |
score |
| Data table |
| ID_REF |
VALUE |
| AFFX-BioB-5_at |
384 |
| AFFX-BioB-M_at |
762.1 |
| AFFX-BioB-3_at |
357.6 |
| AFFX-BioC-5_at |
1658.5 |
| AFFX-BioC-3_at |
1300 |
| AFFX-BioDn-5_at |
1820.8 |
| AFFX-BioDn-3_at |
6870.9 |
| AFFX-CreX-5_at |
10716.3 |
| AFFX-CreX-3_at |
14661.7 |
| AFFX-DapX-5_at |
24.4 |
| AFFX-DapX-M_at |
21.2 |
| AFFX-DapX-3_at |
3 |
| AFFX-LysX-5_at |
32.4 |
| AFFX-LysX-M_at |
23.7 |
| AFFX-LysX-3_at |
5.3 |
| AFFX-PheX-5_at |
2 |
| AFFX-PheX-M_at |
3.2 |
| AFFX-PheX-3_at |
33.9 |
| AFFX-ThrX-5_at |
9 |
| AFFX-ThrX-M_at |
8.3 |
Total number of rows: 22283
Table truncated, full table size 353 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM247878.CEL.gz |
2.1 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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