|
| Status |
Public on Mar 28, 2018 |
| Title |
Patient_CODE18 - MS |
| Sample type |
RNA |
| |
|
| Source name |
PBMCs
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: Metabolic Syndrome
age: 38
tissue: PBMCs
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted using the QIAzol® Lysis Reagent, according to the manufacturer’s instructions. Quality control was performed with Biorad Experion.
|
| Label |
biotin
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
5200271009_B
|
| Data processing |
The data were normalised using quantile normalization (background was not subtracted) with Illumina Genome Studio Software; items with detection p values >0.001 or AVG Signal <700 in more than 1 group were excluded. Data were analyzed with non parametric analysis plus False Discovery Rate, FDR.
|
| |
|
| Submission date |
May 14, 2017 |
| Last update date |
Mar 28, 2018 |
| Contact name |
Antonio Moschetta |
| Organization name |
IRCCS Ospedale Oncologico di Bari
|
| Street address |
Via Orazio Flacco, 65
|
| City |
Bari |
| ZIP/Postal code |
70124 |
| Country |
Italy |
| |
|
| Platform ID |
GPL8179 |
| Series (2) |
| GSE98896 |
Gene expression profiles of PBMCs in healthy subjects (CTRL) and patients with Metabolic Syndrome (MS) - PART 2 - miRNAs |
| GSE98897 |
Gene expression profiles of PBMCs in healthy subjects (CTRL) and patients with Metabolic Syndrome (MS) |
|
