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Sample GSM264851 Query DataSets for GSM264851
Status Public on Sep 30, 2008
Title Regulation of the RPE (retinal pigment epithelium) transcriptome by the neural retina (E7SF3-Ser-2)
Sample type RNA
 
Source name Retinal Pigment Epithelium
Organism Gallus gallus
Characteristics E7 RPE in basal medium supplemented with 2% fetal bovine serum
Extracted molecule total RNA
Extraction protocol RNeasy Protect^ kit (Qiagen)
Label biotin-UTP
Label protocol affymetrix 3'-amplification ivt
 
Hybridization protocol standard
Scan protocol standard
Description N/A
Data processing signal value generated from global scaling
 
Submission date Feb 11, 2008
Last update date Sep 30, 2008
Contact name Lawrence J Rizzolo
E-mail(s) lawrence.rizzolo@yale.edu
Organization name Yale University
Department Dept of Surgery
Street address 333 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platform ID GPL3213
Series (1)
GSE10538 Regulation of the early embryonic RPE (retinal pigment epithelium) transcriptome by the neural retina

Data table header descriptions
ID_REF
VALUE MAS5 value
ABS_CALL present/absent
DETECTION P-VALUE p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 344.091 P 0.00141043
AFFX-BioB-M_at 389.209 P 4.42873e-05
AFFX-BioB-3_at 310.079 P 0.000146581
AFFX-BioC-5_at 975.081 P 5.16732e-05
AFFX-BioC-3_at 953.964 P 5.16732e-05
AFFX-BioDn-5_at 1848.98 P 4.42873e-05
AFFX-BioDn-3_at 4594.76 P 0.00010954
AFFX-CreX-5_at 10837.2 P 4.42873e-05
AFFX-CreX-3_at 12995.9 P 4.42873e-05
AFFX-DapX-5_at 31.4133 A 0.455413
AFFX-DapX-M_at 15.5552 A 0.41138
AFFX-DapX-3_at 8.51687 A 0.724871
AFFX-LysX-5_at 1.69998 A 0.916408
AFFX-LysX-M_at 15.1894 A 0.824672
AFFX-LysX-3_at 5.85027 A 0.574044
AFFX-PheX-5_at 10.579 A 0.712274
AFFX-PheX-M_at 4.45128 A 0.932322
AFFX-PheX-3_at 51.8525 A 0.425962
AFFX-ThrX-5_at 24.1884 A 0.712257
AFFX-ThrX-M_at 5.84574 A 0.749204

Total number of rows: 38535

Table truncated, full table size 1492 Kbytes.




Supplementary file Size Download File type/resource
GSM264851.CEL.gz 3.6 Mb (ftp)(http) CEL
GSM264851.CHP.gz 207.3 Kb (ftp)(http) CHP
Processed data included within Sample table

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