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Sample GSM26660 Query DataSets for GSM26660
Status Public on Jul 17, 2004
Title -Gly80shm2-1 (12440347deltaSHM2-gly80-2march5,03)
Sample type RNA
 
Channel 1
Source name Time course t=0 sample of strain Y02669 grown on minimal + 10 mM glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name Time course 80 min sample of strain Y02669 after cells were filtered and resuspended in minimal -glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Comparison of cDNA made from mRNA of deletion set strain Y02669 grown with glycine to cDNA made from mRNA from the same strain harvested 80 min after resuspension in minimal medium lacking glycine.

The array slides were scanned with GenePix 4000B (Axon Instruments). Spots were found and analyzed with Gene Pix Pro 3.0 analysis software.
 
Submission date Jul 08, 2004
Last update date May 27, 2005
Contact name Andy L Bognar
E-mail(s) a.bognar@utoronto.ca
Phone (416) 978-5854
URL http://lambda.med.utoronto.ca/Bognar/
Organization name University of Toronto
Department Medical Genetics and Biology
Lab Bognar Lab
Street address 1 King's College Circle
City Toronto
State/province Ontario
ZIP/Postal code M5S 1A8
Country Canada
 
Platform ID GPL1336
Series (1)
GSE1554 Time course of glycine addition or withdrawal

Data table header descriptions
ID_REF
F635_Median Sample 1 Median Intensity
B635_Median Sample 1 Median Background
F532_Median Sample 2 Median Intensity
B532_Median Sample 2 Median Background
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Ratio of Median Intensities

Data table
ID_REF F635_Median B635_Median F532_Median B532_Median VALUE PRE_VALUE
1 9622 616 11504 812 -0.2481083 0.842
2 9905 570 14281 788 -0.5311563 0.692
3 1527 549 2906 783 -1.1171613 0.461
4 1650 555 2698 769 -0.8160373 0.568
5 9434 644 13850 823 -0.5670413 0.675
6 10621 697 14276 870 -0.4344033 0.74
7 14089 633 26955 886 -0.9545573 0.516
8 13819 638 24531 839 -0.8468433 0.556
9 47350 750 57844 871 -0.2898273 0.818
10 46244 968 53974 1029 -0.2260043 0.855
11 47907 984 47760 1093 0.0071963 1.005
12 63142 1059 65535 1334 -0.0484123 0.967
13 65535 878 65535 1123 0.0057593 1.004
14 65535 781 65535 1010 0.0057593 1.004
15 62148 700 65535 925 -0.0724833 0.951
16 65535 779 65535 994 0.0043223 1.003
17 7154 771 10252 981 -0.5395203 0.688
18 7149 916 9714 1096 -0.4679323 0.723
19 65535 1255 65535 1465 0.0043223 1.003
20 65535 1159 65535 1509 0.0071963 1.005

Total number of rows: 12800

Table truncated, full table size 531 Kbytes.




Supplementary data files not provided

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