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Sample GSM26667 Query DataSets for GSM26667
Status Public on Jul 17, 2004
Title -Gly80gcn4 (12251984gcn4Gly80)
Sample type RNA
 
Channel 1
Source name Time course t=0 sample of strain Y00249 grown on minimal + 10 mM glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name Time course 80 min sample of strain Y00249 after cells were filtered and resuspended in minimal -glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Comparison of cDNA made from mRNA of deletion set strain Y00249 grown with glycine to cDNA made from mRNA from the same strain harvested 80 min after resuspension in minimal medium lacking glycine.

The array slides were scanned with GenePix 4000B (Axon Instruments). Spots were found and analyzed with Gene Pix Pro 3.0 analysis software.
 
Submission date Jul 08, 2004
Last update date May 27, 2005
Contact name Andy L Bognar
E-mail(s) a.bognar@utoronto.ca
Phone (416) 978-5854
URL http://lambda.med.utoronto.ca/Bognar/
Organization name University of Toronto
Department Medical Genetics and Biology
Lab Bognar Lab
Street address 1 King's College Circle
City Toronto
State/province Ontario
ZIP/Postal code M5S 1A8
Country Canada
 
Platform ID GPL1336
Series (1)
GSE1554 Time course of glycine addition or withdrawal

Data table header descriptions
ID_REF
F635_Median Sample 1 Median Intensity
B635_Median Sample 1 Median Background
F532_Median Sample 2 Median Intensity
B532_Median Sample 2 Median Background
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Ratio of Median Intensities

Data table
ID_REF F635_Median B635_Median F532_Median B532_Median VALUE PRE_VALUE
1 224 108 118 117 6.8579813 116
2 120 93 136 97 -0.5311563 0.692
3 112 84 112 88 0.2228053 1.167
4 92 77 99 81 -0.2636123 0.833
5 117 71 174 79 -1.0469213 0.484
6 148 68 189 78 -0.4719293 0.721
7 143 66 171 75 -0.3183263 0.802
8 137 66 178 75 -0.5374243 0.689
9 199 64 216 73 -0.0831413 0.944
10 206 63 237 71 -0.2159153 0.861
11 696 58 822 69 -0.2395663 0.847
12 694 57 754 67 -0.1093593 0.927
13 528 56 459 66 0.2642363 1.201
14 662 56 599 66 0.1852323 1.137
15 467 59 479 68 -0.0101343 0.993
16 506 58 490 68 0.0867843 1.062
17 170 57 190 68 -0.1109163 0.926
18 162 59 204 71 -0.3695953 0.774
19 551 59 494 72 0.2215683 1.166
20 554 57 597 72 -0.0785643 0.947

Total number of rows: 12800

Table truncated, full table size 430 Kbytes.




Supplementary data files not provided

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