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Sample GSM26670 Query DataSets for GSM26670
Status Public on Jul 17, 2004
Title -Gly80bas1-1 (12444018BAS1-gly80)
Sample type RNA
 
Channel 1
Source name Time course t=0 sample of strain Y06015 grown on minimal + 10 mM glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name Time course 80 min sample of strain Y06015 after cells were filtered and resuspended in minimal -glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Comparison of cDNA made from mRNA of deletion set strain Y06015 grown with glycine to cDNA made from mRNA from the same strain harvested 80 min after resuspension in minimal medium lacking glycine.

The array slides were scanned with GenePix 4000B (Axon Instruments). Spots were found and analyzed with Gene Pix Pro 3.0 analysis software.
 
Submission date Jul 09, 2004
Last update date May 27, 2005
Contact name Andy L Bognar
E-mail(s) a.bognar@utoronto.ca
Phone (416) 978-5854
URL http://lambda.med.utoronto.ca/Bognar/
Organization name University of Toronto
Department Medical Genetics and Biology
Lab Bognar Lab
Street address 1 King's College Circle
City Toronto
State/province Ontario
ZIP/Postal code M5S 1A8
Country Canada
 
Platform ID GPL1336
Series (1)
GSE1554 Time course of glycine addition or withdrawal

Data table header descriptions
ID_REF
F635_Median Sample 1 Median Intensity
B635_Median Sample 1 Median Background
F532_Median Sample 2 Median Intensity
B532_Median Sample 2 Median Background
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Ratio of Median Intensities

Data table
ID_REF F635_Median B635_Median F532_Median B532_Median VALUE PRE_VALUE
1 4816 401 3960 188 0.2265093 1.17
2 3372 407 3987 180 -0.3603053 0.779
3 673 433 532 188 -0.5187013 0.698
4 539 402 388 163 -0.7154863 0.609
5 3624 441 3731 164 -0.1648843 0.892
6 2743 433 3157 179 -0.3658713 0.776
7 2667 392 4365 176 -0.8809763 0.543
8 2713 371 4743 164 -0.9686053 0.511
9 15575 478 18801 192 -0.3022263 0.811
10 13191 620 16259 328 -0.3419033 0.789
11 11354 598 14645 317 -0.4131153 0.751
12 15019 542 18858 298 -0.3584543 0.78
13 19557 455 27323 203 -0.5063533 0.704
14 10625 419 10388 178 0.0000003 1
15 15256 467 10806 197 0.4792313 1.394
16 38024 518 23225 227 0.7057573 1.631
17 1626 500 1858 208 -0.5521563 0.682
18 1620 524 1723 236 -0.4402633 0.737
19 19181 564 16464 284 0.2028883 1.151
20 17490 532 15869 250 0.1190243 1.086

Total number of rows: 12800

Table truncated, full table size 501 Kbytes.




Supplementary data files not provided

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