NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM26672 Query DataSets for GSM26672
Status Public on Jul 17, 2004
Title -Gly80-1 (12260127gly80-2nov27,02)
Sample type RNA
 
Channel 1
Source name Time course t=0 sample of strain W3031A grown on minimal + 10 mM glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name Time course 80 min sample of strain W3031A after cells were filtered and resuspended in minimal -glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Comparison of cDNA made from mRNA of deletion set strain W3031A grown with glycine to cDNA made from mRNA from the same strain harvested 80 min after resuspension in minimal medium lacking glycine.

The array slides were scanned with GenePix 4000B (Axon Instruments). Spots were found and analyzed with Gene Pix Pro 3.0 analysis software.
 
Submission date Jul 09, 2004
Last update date May 27, 2005
Contact name Andy L Bognar
E-mail(s) a.bognar@utoronto.ca
Phone (416) 978-5854
URL http://lambda.med.utoronto.ca/Bognar/
Organization name University of Toronto
Department Medical Genetics and Biology
Lab Bognar Lab
Street address 1 King's College Circle
City Toronto
State/province Ontario
ZIP/Postal code M5S 1A8
Country Canada
 
Platform ID GPL1336
Series (1)
GSE1554 Time course of glycine addition or withdrawal

Data table header descriptions
ID_REF
F635_Median Sample 1 Median Intensity
B635_Median Sample 1 Median Background
F532_Median Sample 2 Median Intensity
B532_Median Sample 2 Median Background
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Ratio of Median Intensities

Data table
ID_REF F635_Median B635_Median F532_Median B532_Median VALUE PRE_VALUE
1 1550 429 3110 577 -1.1746213 0.443
2 2727 423 4918 622 -0.8996953 0.536
3 431 429 1562 635 -8.9657843 0.002
4 473 437 1637 671 -4.7563313 0.037
5 1587 436 3609 703 -1.3364283 0.396
6 1807 451 4144 741 -1.3291603 0.398
7 1345 437 2529 849 -0.8889693 0.54
8 1163 438 3023 1010 -1.4739313 0.36
9 3947 457 11723 994 -1.6214883 0.325
10 4841 483 13303 976 -1.4981793 0.354
11 7541 463 11278 1000 -0.5374243 0.689
12 7289 461 12148 986 -0.7083963 0.612
13 11214 447 15579 1000 -0.4363543 0.739
14 10651 446 15457 979 -0.5043053 0.705
15 770 445 3957 991 -3.1844253 0.11
16 846 424 4317 995 -2.9771003 0.127
17 1154 439 3400 979 -1.7612133 0.295
18 1111 437 3570 974 -1.9434163 0.26
19 7273 420 48196 994 -2.7858753 0.145
20 7468 409 49885 970 -2.7958593 0.144

Total number of rows: 12800

Table truncated, full table size 501 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap