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Sample GSM26682 Query DataSets for GSM26682
Status Public on Jul 17, 2004
Title -Gly20-3 (12192129gly20)
Sample type RNA
 
Channel 1
Source name Time course t=0 sample of strain W3031A grown on minimal + 10 mM glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name Time course 20 min sample of strain W3031A after cells were filtered and resuspended in minimal -glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Comparison of cDNA made from mRNA of deletion set strain W3031A grown with glycine to cDNA made from mRNA from the same strain harvested 20 min after resuspension in minimal medium lacking glycine.

The array slides were scanned with GenePix 4000B (Axon Instruments). Spots were found and analyzed with Gene Pix Pro 3.0 analysis software.
 
Submission date Jul 09, 2004
Last update date May 27, 2005
Contact name Andy L Bognar
E-mail(s) a.bognar@utoronto.ca
Phone (416) 978-5854
URL http://lambda.med.utoronto.ca/Bognar/
Organization name University of Toronto
Department Medical Genetics and Biology
Lab Bognar Lab
Street address 1 King's College Circle
City Toronto
State/province Ontario
ZIP/Postal code M5S 1A8
Country Canada
 
Platform ID GPL1337
Series (1)
GSE1554 Time course of glycine addition or withdrawal

Data table header descriptions
ID_REF
F635_Median Sample 1 Median Intensity
B635_Median Sample 1 Median Background
F532_Median Sample 2 Median Intensity
B532_Median Sample 2 Median Background
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Ratio of Median Intensities

Data table
ID_REF F635_Median B635_Median F532_Median B532_Median VALUE PRE_VALUE
1 1343 630 1868 1210 0.1163653 1.084
2 1331 691 2041 1336 -0.1392363 0.908
3 797 680 1855 1382 -2.0174173 0.247
4 928 659 1812 1324 -0.8598763 0.551
5 2131 682 2565 1290 0.1839633 1.136
6 2293 711 2840 1303 0.0412433 1.029
7 1154 727 1891 1349 -0.3437323 0.788
8 1175 667 1953 1323 -0.3111483 0.806
9 11542 630 7551 1317 0.8073553 1.75
10 6948 641 5283 1318 0.6699343 1.591
11 7108 641 5606 1290 0.5830383 1.498
12 7015 661 5300 1260 0.6535193 1.573
13 6790 687 5112 1263 0.6653933 1.586
14 7107 739 5877 1264 0.4646683 1.38
15 4291 683 4189 1216 0.2797683 1.214
16 4504 666 4140 1145 0.3572703 1.281
17 3149 669 2934 1132 0.4604803 1.376
18 1882 644 2094 1161 0.4081683 1.327
19 16524 672 14226 1196 0.2833293 1.217
20 21870 682 18122 1151 0.3196183 1.248

Total number of rows: 12800

Table truncated, full table size 502 Kbytes.




Supplementary data files not provided

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