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Sample GSM26683 Query DataSets for GSM26683
Status Public on Jul 17, 2004
Title -Gly80-5 (12180330Gly80mohan)
Sample type RNA
 
Channel 1
Source name Time course t=0 sample of strain W3031A grown on minimal + 10 mM glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name Time course 80 min sample of strain W3031A after cells were filtered and resuspended in minimal -glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Comparison of cDNA made from mRNA of deletion set strain W3031A grown with glycine to cDNA made from mRNA from the same strain harvested 80 min after resuspension in minimal medium lacking glycine.

The array slides were scanned with GenePix 4000B (Axon Instruments). Spots were found and analyzed with Gene Pix Pro 3.0 analysis software.
 
Submission date Jul 09, 2004
Last update date May 27, 2005
Contact name Andy L Bognar
E-mail(s) a.bognar@utoronto.ca
Phone (416) 978-5854
URL http://lambda.med.utoronto.ca/Bognar/
Organization name University of Toronto
Department Medical Genetics and Biology
Lab Bognar Lab
Street address 1 King's College Circle
City Toronto
State/province Ontario
ZIP/Postal code M5S 1A8
Country Canada
 
Platform ID GPL1337
Series (1)
GSE1554 Time course of glycine addition or withdrawal

Data table header descriptions
ID_REF
F635_Median Sample 1 Median Intensity
B635_Median Sample 1 Median Background
F532_Median Sample 2 Median Intensity
B532_Median Sample 2 Median Background
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Ratio of Median Intensities

Data table
ID_REF F635_Median B635_Median F532_Median B532_Median VALUE PRE_VALUE
1 371 351 569 225 -4.1078033 0.058
2 390 411 556 231 -0.065
3 445 429 464 236 -3.8365013 0.07
4 474 435 464 242 -2.5063533 0.176
5 515 501 960 262 -5.6438563 0.02
6 524 440 891 247 -2.9434163 0.13
7 498 437 485 247 -1.9657843 0.256
8 496 555 531 292 -0.247
9 1247 911 2132 1259 -1.3770703 0.385
10 1008 855 1586 469 -2.8677523 0.137
11 1565 524 2444 283 -1.0528953 0.482
12 1559 464 2386 259 -0.9573563 0.515
13 866 565 1719 273 -2.2653453 0.208
14 904 575 1683 277 -2.0954203 0.234
15 947 562 1738 262 -1.9378783 0.261
16 1092 570 1775 249 -1.5479323 0.342
17 2592 573 4070 242 -0.9241253 0.527
18 2091 573 3322 229 -1.0262053 0.491
19 3316 610 7897 223 -1.5022603 0.353
20 4086 507 7858 209 -1.0954203 0.468

Total number of rows: 12800

Table truncated, full table size 491 Kbytes.




Supplementary data files not provided

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