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Sample GSM26684 Query DataSets for GSM26684
Status Public on Jul 17, 2004
Title -Gly40-3 (12172719Gly40)
Sample type RNA
 
Channel 1
Source name Time course t=0 sample of strain W3031A grown on minimal + 10 mM glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name Time course 40 min sample of strain W3031A after cells were filtered and resuspended in minimal -glycine
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Comparison of cDNA made from mRNA of deletion set strain W3031A grown with glycine to cDNA made from mRNA from the same strain harvested 40 min after resuspension in minimal medium lacking glycine.

The array slides were scanned with GenePix 4000B (Axon Instruments). Spots were found and analyzed with Gene Pix Pro 3.0 analysis software.
 
Submission date Jul 09, 2004
Last update date May 27, 2005
Contact name Andy L Bognar
E-mail(s) a.bognar@utoronto.ca
Phone (416) 978-5854
URL http://lambda.med.utoronto.ca/Bognar/
Organization name University of Toronto
Department Medical Genetics and Biology
Lab Bognar Lab
Street address 1 King's College Circle
City Toronto
State/province Ontario
ZIP/Postal code M5S 1A8
Country Canada
 
Platform ID GPL1337
Series (1)
GSE1554 Time course of glycine addition or withdrawal

Data table header descriptions
ID_REF
F635_Median Sample 1 Median Intensity
B635_Median Sample 1 Median Background
F532_Median Sample 2 Median Intensity
B532_Median Sample 2 Median Background
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Ratio of Median Intensities

Data table
ID_REF F635_Median B635_Median F532_Median B532_Median VALUE PRE_VALUE
1 248 140 327 134 -0.8365013 0.56
2 241 139 329 134 -0.9351173 0.523
3 245 143 259 131 -0.3273483 0.797
4 247 155 262 131 -0.5104573 0.702
5 338 160 449 130 -0.8416633 0.558
6 383 180 505 131 -0.8809763 0.543
7 308 202 295 138 -0.5670413 0.675
8 282 212 333 137 -1.4860043 0.357
9 1399 182 1187 134 0.2091413 1.156
10 1349 175 1063 133 0.3357123 1.262
11 1205 172 1115 127 0.0648833 1.046
12 1135 166 1074 115 0.0143553 1.01
13 691 171 858 106 -0.5332423 0.691
14 726 168 761 102 -0.2395663 0.847
15 598 168 767 100 -0.6326293 0.645
16 636 164 783 97 -0.5395203 0.688
17 1365 167 1551 96 -0.2810363 0.823
18 1253 160 1452 93 -0.3147333 0.804
19 2591 148 4140 93 -0.7273803 0.604
20 1992 142 3353 94 -0.8160373 0.568

Total number of rows: 12800

Table truncated, full table size 479 Kbytes.




Supplementary data files not provided

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