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Sample GSM2672173 Query DataSets for GSM2672173
Status Public on Jun 16, 2020
Title 4433719007_F: whole blood-HIV-HIV
Sample type RNA
 
Source name whole blood-HIV-HIV
Organism Homo sapiens
Characteristics tissue: whole blood
dataset: HIV
sample class: HIV
Extracted molecule total RNA
Extraction protocol RNA was extracted with MagMAX™ RNA Isolation Kit
Label biotin
Label protocol biotin Biotinylated cRNA were prepared with the Illumina® TotalPrep-96 RNA Amplification Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol tandard Illumina scanning protocol with BeadArray Reader 500X
Data processing The data were normalised using average normalization with Genome Studio
 
Submission date Jun 19, 2017
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6884
Series (2)
GSE100150 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring
GSE100151 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (HIV Datasets)

Data table header descriptions
ID_REF
VALUE The data were normalised using average normalization with Genome Studio
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 -0.6693 0.4704
ILMN_1711886 135.2168 0
ILMN_1759828 21.2881 0.0119
ILMN_1674376 11.5082 0.0395
ILMN_1711888 -0.6906 0.4717
ILMN_2111932 -3.0749 0.6798
ILMN_1686362 0.7466 0.3597
ILMN_1723874 1767.6716 0
ILMN_1662391 5.1469 0.1357
ILMN_1662390 -3.8783 0.7418
ILMN_1686361 -5.1789 0.8445
ILMN_1686360 56.2253 0.0013
ILMN_1723871 47.7354 0.0013
ILMN_2086417 566.1483 0
ILMN_1686367 3496.6399 0
ILMN_1662397 -5.0821 0.834
ILMN_1721218 -0.1383 0.4242
ILMN_1711883 -3.1095 0.6798
ILMN_2351611 192.2629 0
ILMN_1674373 -1.7941 0.5731

Total number of rows: 48803

Table truncated, full table size 1274 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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