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Sample GSM2672187 Query DataSets for GSM2672187
Status Public on Jun 16, 2020
Title 4424548053_G: whole blood-HIV-HIV
Sample type RNA
 
Source name whole blood-HIV-HIV
Organism Homo sapiens
Characteristics tissue: whole blood
dataset: HIV
sample class: HIV
Extracted molecule total RNA
Extraction protocol RNA was extracted with MagMAX™ RNA Isolation Kit
Label biotin
Label protocol biotin Biotinylated cRNA were prepared with the Illumina® TotalPrep-96 RNA Amplification Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol tandard Illumina scanning protocol with BeadArray Reader 500X
Data processing The data were normalised using average normalization with Genome Studio
 
Submission date Jun 19, 2017
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6884
Series (2)
GSE100150 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring
GSE100151 A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (HIV Datasets)

Data table header descriptions
ID_REF
VALUE The data were normalised using average normalization with Genome Studio
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1708238 -1.1809 0.4928
ILMN_1711886 144.5665 0
ILMN_1759828 7.1588 0.1199
ILMN_1674376 2.539 0.2727
ILMN_1711888 0.9985 0.3636
ILMN_2111932 8.4916 0.087
ILMN_1686362 -2.0071 0.5665
ILMN_1723874 1891.6195 0
ILMN_1662391 -1.0773 0.4888
ILMN_1662390 -2.1191 0.5718
ILMN_1686361 -3.8831 0.7101
ILMN_1686360 26.4881 0.0066
ILMN_1723871 66.2859 0
ILMN_2086417 963.7879 0
ILMN_1686367 4715.2769 0
ILMN_1662397 -5.8626 0.8445
ILMN_1721218 0.6244 0.3834
ILMN_1711883 -3.4514 0.6785
ILMN_2351611 315.544 0
ILMN_1674373 10.9479 0.058

Total number of rows: 48803

Table truncated, full table size 1269 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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