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Sample GSM2691195 Query DataSets for GSM2691195
Status Public on Jun 06, 2020
Title infantile hemangioama tumor tissue microRNA 3
Sample type RNA
 
Source name infantile hemangioma (IH) tumor tissue
Organism Homo sapiens
Characteristics age: 6 months
gender: male
Treatment protocol Tissues from IH surgury were immersed overnight in RNAlater at 4 ℃ and preserved at -80 ℃.
Growth protocol IH and matched non-tumor skin tissues
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix)
 
Hybridization protocol Following fragmentation, cRNA were hybridized for 16 hr at 48C on GeneChip Hybridization Oven 645. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G3000 7G.
Description microRNA expression data from infantile hemangioma (IH) tumor tissue
Data processing The data were analyzed with RMA using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
 
Submission date Jun 30, 2017
Last update date Jun 06, 2020
Contact name Cong Fu
E-mail(s) cong3399@outlook.com
Organization name Shandong provincial hospital
Street address No. 324, jingwu Road, Huaiyin Dist
City Jinan
State/province Shandong
ZIP/Postal code 250021
Country China
 
Platform ID GPL21572
Series (1)
GSE100682 microRNA expression in infantile hemangioma (IH) and normal skin tissues

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
20535236 0.800844
20519091 0.905522
20529974 1.4735
20516816 7.30131
20528686 0.55075
20519922 0.789467
20511197 1.07619
20533421 0.318548
20504747 6.16595
20528463 1.08761
20513382 7.99705
20505255 0.579609
20534390 1.18251
20527929 0.796755
20522223 6.14384
20509658 0.972858
20520816 2.72419
20518866 0.849692
20528746 12.5425
20508856 0.903668

Total number of rows: 36249

Table truncated, full table size 619 Kbytes.




Supplementary file Size Download File type/resource
GSM2691195_tumor3.CEL.gz 726.1 Kb (ftp)(http) CEL
Processed data included within Sample table

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