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Sample GSM2701740 Query DataSets for GSM2701740
Status Public on Jul 16, 2017
Title ChIP-seq from limb (ENCLB768STI)
Sample type SRA
 
Source name Mus musculus strain B6NCrl limb tissue mixed sex embryo (10.5 days)
Organism Mus musculus
Characteristics antibody: H3K9me3
tissue_type: limb
biomaterial_type: tissue
description: Limb from 51 embryonic 10.5 day mice
biosample encode accession: ENCBS892NXC (SAMN05733899)
age: 10.5 day
dev stage: embryonic
donor_id: ENCDO956IXV
Sex: pooled male and female
health state: healthy
lab: Len Pennacchio, LBNL
link: ENCBS892NXC at ENCODE; https://www.encodeproject.org/ENCBS892NXC/
link: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/
Extracted molecule genomic DNA
Extraction protocol general protocol: https://www.encodeproject.org/documents/18580e80-0907-4258-a412-46bcc37bd040/@@download/attachment/Ren%20Lab%20ENCODE%20Chromatin%20Immunoprecipitation%20Protocol%20MicroChIP.pdf
general protocol: https://www.encodeproject.org/documents/1fcaab50-6ca0-4778-88cb-5f6b85170d21/@@download/attachment/Ren%20Lab%20ENCODE%20Tissue%20Fixation%20and%20Sonication%20Protocol%20MicroChIP.pdf
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 4000
 
Description https://www.encodeproject.org/experiments/ENCSR890ACP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 10.5 day mouse limb
experiment encode accession: ENCSR890ACP
assay title: ChIP-seq
possible controls: ENCSR687ALB
encode release date: 2016-07-12
lab: Bing Ren, UCSD
library encode accession: ENCLB768STI
size range: 300-500
Data processing See GSM*_README.txt supplementary file linked below
 
Submission date Jul 12, 2017
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL21103
Series (1)
GSE101361 ChIP-seq from limb (ENCSR890ACP)
Relations
BioSample SAMN05733899
SRA SRX3010223

Supplementary file Size Download File type/resource
GSM2701740_ENCLB768STI_README.txt.gz 284 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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