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Sample GSM277 Query DataSets for GSM277
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-25, tumor 2 (part 2 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=1
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=32
died=FALSE
tumorsize.cm=2.7
sex=f
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625252 reuse=5 date=04-Jul-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 4916 5476 -560
2 5570 5476 94
3 13413 5476 7937
4 6038 5476 562
5 4101 5476 -1375
6 54227 5476 48751
7 9065 5476 3589
8 3258 5476 -2218
9 4979 5476 -497
10 5403 5476 -73
11 9207 5476 3731
12 8772 5476 3296
13 5698 5476 222
14 6269 5476 793
15 3870 5476 -1606
16 11857 5476 6381
17 37680 6084 31596
18 5864 6084 -220
19 3376 6084 -2708
20 2900 6084 -3184

Total number of rows: 36864

Table truncated, full table size 808 Kbytes.




Supplementary data files not provided

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