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GEO accession:
Sample GSM2802
Query DataSets for GSM2802
Status
Public on Nov 21, 2002
Title
Mnk_3204-T-B
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3204
Typical progression group
Baseline Un-Infected sample
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
17
2
18
0.85
30281.4
P
AFFX-BioB-M_at
19
0
20
0.95
47070.3
P
AFFX-BioB-3_at
18
0
19
0.9
30211.4
P
AFFX-BioC-5_at
18
0
19
0.9
80133.9
P
AFFX-BioC-3_at
19
0
20
0.95
78275.2
P
AFFX-BioDn-5_at
18
0
20
0.9
38091.7
P
AFFX-BioDn-3_at
16
0
19
0.8
88938
P
AFFX-CreX-5_at
20
0
20
1
545293.9
P
AFFX-CreX-3_at
19
0
20
0.95
707540.8
P
AFFX-BioB-5_st
5
5
19
0.25
1611.9
A
AFFX-BioB-M_st
5
6
18
0.25
221.2
A
AFFX-BioB-3_st
4
10
20
0.2
-7132.9
A
AFFX-BioC-5_st
2
7
17
0.1
-2453.1
A
AFFX-BioC-3_st
7
8
19
0.35
-1174.4
A
AFFX-BioDn-5_st
6
6
19
0.3
2938.2
A
AFFX-BioDn-3_st
6
2
19
0.3
5855.8
A
AFFX-CreX-5_st
10
3
18
0.5
4836.8
P
AFFX-CreX-3_st
8
4
18
0.4
2366
A
hum_alu_at
68
0
69
0.99
1673325.5
P
AFFX-DapX-5_at
7
4
19
0.35
536.8
A
Total number of rows:
7129
Table truncated, full table size
220 Kbytes
.
Supplementary data files not provided
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