GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM2804
Query DataSets for GSM2804
Status
Public on Nov 21, 2002
Title
Mnk_3206-R-7
Sample type
RNA
Source name
PBMC from Rhesus Macaque
Organism
Macaca mulatta
Extracted molecule
total RNA
Description
Animal #3206
Rapid progression group
Seven weeks Post-Infection with SIV MAC251
Submission date
Nov 21, 2002
Last update date
May 27, 2005
Contact name
Maryanne Vahey
E-mail(s)
mvahey@hivresearch.org
Phone
301-251-5058
Fax
301-762-7460
Organization name
Walter Reed Army Institute of Research
Department
Lab
Laboratory of Functional Genomics
Street address
1600 East Gude Drive
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Platform ID
GPL80
Series (1)
GSE512
Peripheral Blood Mononuclear Cells of Rhesus Macaques Infected with SIVmac251
Data table header descriptions
ID_REF
Positive
Number of positive probe pairs
Negative
Number of negative probe pairs
Pairs In Avg
Trimmed probe pair set
Pos Fraction
Positive/pairs used
VALUE
Average difference intensity
ABS_CALL
Absolute call of Presence or Absence of gene transcript in sample
Data table
ID_REF
Positive
Negative
Pairs In Avg
Pos Fraction
VALUE
ABS_CALL
AFFX-BioB-5_at
14
1
19
0.7
43191.9
P
AFFX-BioB-M_at
18
0
19
0.9
49376
P
AFFX-BioB-3_at
17
0
19
0.85
35638.4
P
AFFX-BioC-5_at
18
0
19
0.9
74021.8
P
AFFX-BioC-3_at
19
0
20
0.95
88026
P
AFFX-BioDn-5_at
18
0
19
0.9
40013.4
P
AFFX-BioDn-3_at
17
0
18
0.85
124222.8
P
AFFX-CreX-5_at
20
0
20
1
578495.8
P
AFFX-CreX-3_at
20
0
20
1
677059.4
P
AFFX-BioB-5_st
5
4
19
0.25
3677.5
A
AFFX-BioB-M_st
4
4
17
0.2
-1301.2
A
AFFX-BioB-3_st
4
7
20
0.2
-4909.8
A
AFFX-BioC-5_st
2
5
18
0.1
-3345.1
A
AFFX-BioC-3_st
5
5
19
0.25
100.9
A
AFFX-BioDn-5_st
8
4
19
0.4
2265
A
AFFX-BioDn-3_st
6
2
19
0.3
1533.3
A
AFFX-CreX-5_st
5
2
18
0.25
2372.8
A
AFFX-CreX-3_st
7
4
18
0.35
1241.4
A
hum_alu_at
67
0
69
0.97
1409014.9
P
AFFX-DapX-5_at
5
2
19
0.25
1053.8
A
Total number of rows:
7129
Table truncated, full table size
220 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|