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| Status |
Public on Dec 07, 2017 |
| Title |
84-8f-s1 |
| Sample type |
SRA |
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| Source name |
Whole Animal
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| Organism |
Schmidtea mediterranea |
| Characteristics |
biotype: Sexual S2F2
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| Extracted molecule |
polyA RNA |
| Extraction protocol |
PolyA selection
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| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina HiSeq 2000 |
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| Description |
NHR-1 RNAi 8 feedings replicate s1
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| Data processing |
Alignment with bowtie2 (-k 100)
Genome_build: Combined transcriptome of GDAG01, GCZZ01 and genbank S. mediterranea transcripts
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| Submission date |
Dec 06, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Alejandro Sanchez Alvarado |
| E-mail(s) |
asa@stowers.org
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| Organization name |
Stowers Institute for Medical Research
|
| Lab |
Sanchez Alvarado Lab
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| Street address |
1000 East 50th Street
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| City |
Kansas City |
| State/province |
MO |
| ZIP/Postal code |
61410 |
| Country |
USA |
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| Platform ID |
GPL15553 |
| Series (1) |
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| Relations |
| BioSample |
SAMN08137089 |
| SRA |
SRX3447929 |
| Supplementary data files not provided |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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