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Sample GSM288 Query DataSets for GSM288
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-28, tumor 1 (part 2 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=IV
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=8
sex=m
age=44
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3626232 reuse=2 date=24-Feb-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 509491 56644 452847
2 83928 56644 27284
3 138152 56644 81508
4 61204 56644 4560
5 67503 56644 10859
6 77954 56644 21310
7 25581 56644 -31063
8 212227 56644 155583
9 199829 56644 143185
10 103620 56644 46976
11 77353 56644 20709
12 592667 56644 536023
13 27229 56644 -29415
14 105526 56644 48882
15 30165 56644 -26479
16 20567 56644 -36077
17 927664 57600 870064
18 72729 57600 15129
19 78800 57600 21200
20 42659 57600 -14941

Total number of rows: 36864

Table truncated, full table size 870 Kbytes.




Supplementary data files not provided

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