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Sample GSM2892311 Query DataSets for GSM2892311
Status Public on Mar 18, 2019
Title Hippocampus F WT G07
Sample type RNA
 
Source name Hippocampus
Organism Mus musculus
Characteristics age: 6 weeks
genotype: FIRE +/+
Sex: Female
strain: C57BL/6J/CBA
tissue: hippocampus
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA followed by purification with Rneasy Mini kit
Label Biotin
Label protocol GeneChip Whole Transcript Labeling Kit (Applied Biosystems)
 
Hybridization protocol GeneTitan
Scan protocol GeneChip Command Console
Description Gene expression data from hippocampus
Data processing CEL files were normalised (RMA) in R/Bioconductor.
 
Submission date Dec 18, 2017
Last update date Mar 18, 2019
Contact name Clare Pridans
E-mail(s) clare.pridans@ed.ac.uk
Organization name Centre for Inflammation Research
Department University of Edinburgh
Street address 47 Little France Crescent
City Edinburgh
ZIP/Postal code EH16 4TJ
Country United Kingdom
 
Platform ID GPL11533
Series (1)
GSE108207 Expression data from FIRE deficient mice

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
10344614 4.058212
10344616 1.379763
10344620 2.779388
10344622 3.420887
10344624 7.260656
10344633 7.681776
10344637 8.204392
10344653 3.014771
10344658 6.790583
10344674 2.171555
10344679 6.866531
10344707 8.490757
10344713 7.542572
10344715 2.177765
10344717 1.808741
10344719 3.493152
10344721 1.315541
10344723 5.63419
10344725 7.900587
10344741 8.827847

Total number of rows: 35556

Table truncated, full table size 621 Kbytes.




Supplementary file Size Download File type/resource
GSM2892311_Titan_EG0109_11012HD_G07_F_WT.CEL.gz 3.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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