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Sample GSM291 Query DataSets for GSM291
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-28, tumor 2 (part 2 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=IV
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=8
sex=m
age=44
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3626215 reuse=3 date=28-Apr-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 29277 23716 5561
2 24180 23716 464
3 61572 23716 37856
4 22584 23716 -1132
5 152458 23716 128742
6 989475 23716 965759
7 23587 23716 -129
8 18113 23716 -5603
9 13973 23716 -9743
10 57393 23716 33677
11 172599 23716 148883
12 34504 23716 10788
13 12504 23716 -11212
14 31271 23716 7555
15 28621 23716 4905
16 14451 23716 -9265
17 256184 32761 223423
18 49341 32761 16580
19 27132 32761 -5629
20 14027 32761 -18734

Total number of rows: 36864

Table truncated, full table size 855 Kbytes.




Supplementary data files not provided

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